STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47394.1alpha-L-fucosidase. (438 aa)    
Predicted Functional Partners:
AFN46778.1
alpha-L-fucosidase.
  
  
 
0.910
AFN45989.1
Hypothetical protein.
 
     0.903
AFN47064.1
ABC transporter, solute-binding protein.
 
     0.807
AFN44959.1
Putative glucokinase.
       0.781
AFN47051.1
ABC transporter, permease protein.
       0.773
AFN47695.1
ABC transporter, permease protein.
       0.773
AFN45705.1
CutC family protein; Belongs to the CutC family.
 
   
 0.608
AFN45394.1
Carbohydrate kinase, FGGY family protein.
 
     0.534
AFN45413.1
GDSL-like protein.
 
     0.497
lacZ
Beta-galactosidase.
 
   
 0.469
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.