Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46237.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
aat
Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
 
     0.768
AFN45731.1
Glycerate kinase domain protein.
  
     0.749
AFN44981.1
Bacterial phospho-glucose isomerase C-terminal domain protein.
  
     0.745
AFN45666.1
Bacterial membrane flanked domain protein.
  
     0.677
AFN47423.1
Putative membrane protein.
  
     0.676
cbiX_2
Sirohydrochlorin cobaltochelatase.
  
     0.658
AFN45936.1
Hypothetical protein.
  
     0.634
AFN45050.1
Hypothetical protein.
  
     0.633
AFN46741.1
Alanine racemase, N-terminal domain protein.
  
     0.626
AFN47421.1
Hydrolase, NUDIX family; Belongs to the Nudix hydrolase family.
  
     0.619
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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