STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45936.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AFN45127.1
AP endonuclease, family 2.
 
     0.701
AFN45829.1
Putative membrane protein.
  
     0.684
AFN47800.1
Hypothetical protein.
  
     0.670
AFN46237.1
Hypothetical protein.
  
     0.634
AFN46186.1
Hypothetical protein.
  
     0.582
AFN47630.1
Proline dehydrogenase.
       0.536
AFN47834.1
Penicillin-binding protein, transpeptidase domain protein.
  
     0.530
AFN45692.1
Putative membrane protein.
  
     0.512
hisS
histidine--tRNA ligase.
  
     0.506
AFN45170.1
Methionine synthase, vitamin-B12 independent.
  
     0.473
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.