STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45127.1AP endonuclease, family 2. (269 aa)    
Predicted Functional Partners:
AFN47630.1
Proline dehydrogenase.
       0.815
AFN45936.1
Hypothetical protein.
 
     0.688
AFN46521.1
CAAX amino terminal protease family protein.
 
     0.562
AFN45585.1
Putative twin arginine-targeting protein translocase TatB.
  
     0.548
AFN45170.1
Methionine synthase, vitamin-B12 independent.
  
     0.532
AFN47361.1
Hypothetical protein.
       0.510
AFN47446.1
Putative 5-deoxy-glucuronate isomerase.
  
  
 0.470
AFN46911.1
Lsr2 family protein.
  
     0.459
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.456
AFN46186.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.