STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45886.1ABC transporter, ATP-binding protein. (315 aa)    
Predicted Functional Partners:
AFN47673.1
Putative membrane protein.
  
 0.974
AFN46762.1
ABC transporter, ATP-binding protein.
    
0.905
AFN47816.1
ABC transporter, ATP-binding domain protein.
    
0.806
AFN45772.1
Hypothetical protein.
 
     
0.738
AFN47263.1
Histidine kinase.
 
     0.729
AFN46709.1
Response regulator receiver domain protein.
 
     0.550
AFN46346.1
Efflux ABC transporter, permease protein.
 
     0.496
AFN45016.1
ABC transporter, ATP-binding protein.
 
    
0.402
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.