STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45819.1Putative 4-hydroxybutyrate coenzyme A transferase. (408 aa)    
Predicted Functional Partners:
AFN46632.1
Putative neutral zinc metallopeptidase.
       0.773
AFN46812.1
methylmalonyl-CoA mutase.
  
  
 0.691
nifJ
Pyruvate synthase.
     
 0.651
gltA
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.646
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
  
 0.504
AFN47421.1
Hydrolase, NUDIX family; Belongs to the Nudix hydrolase family.
       0.495
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.477
AFN47463.1
KR domain protein.
  
 
 0.471
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.443
AFN46107.1
Citrate (Si)-synthase domain protein.
  
 
 0.439
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.