STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46747.1ABC transporter, ATP-binding domain protein. (278 aa)    
Predicted Functional Partners:
AFN47391.1
Transcriptional regulator, GntR family.
    0.961
AFN46034.1
Putative membrane protein.
       0.773
AFN47390.1
Hypothetical protein.
       0.515
AFN45713.1
ABC transporter, ATP-binding protein.
 
     0.467
AFN46098.1
ABC transporter transmembrane region.
  
  0.425
AFN46933.1
Transcriptional regulator, GntR family.
 
    0.412
AFN46563.1
Hypothetical protein.
 
    0.411
AFN46596.1
ABC transporter transmembrane region.
  
  0.408
AFN45933.1
Putative membrane protein.
 
    0.407
AFN47587.1
ABC transporter, ATP-binding protein.
  
  0.405
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.