STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46286.1Peptidase, M28 family. (560 aa)    
Predicted Functional Partners:
AFN47003.1
Glycosyl hydrolase family 16.
  
     0.647
AFN45827.1
Beta-lactamase.
  
   
 0.577
AFN47492.1
Transposase, IS4 family.
  
     0.542
AFN45423.1
Putative cardiolipin synthetase.
    
 0.500
AFN46550.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
  
     0.495
AFN47235.1
CRISPR-associated RAMP protein.
  
     0.492
AFN47002.1
Hypothetical protein.
  
     0.483
AFN46955.1
Hypothetical protein.
  
 
  0.476
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.474
AFN45824.1
Tetracyclin repressor, C-terminal all-alpha domain protein.
  
     0.454
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.