Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AFN46286.1Peptidase, M28 family. (560 aa)    
Predicted Functional Partners:
AFN47003.1
Glycosyl hydrolase family 16.
  
     0.647
AFN45827.1
Beta-lactamase.
  
   
 0.572
AFN47492.1
Transposase, IS4 family.
  
     0.542
AFN46550.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
  
     0.495
AFN47235.1
CRISPR-associated RAMP protein.
  
     0.492
AFN47002.1
Hypothetical protein.
  
   
 0.484
AFN45824.1
Tetracyclin repressor, C-terminal all-alpha domain protein.
  
     0.454
AFN46957.1
GroES-like protein.
       0.451
AFN47055.1
Hypothetical protein.
  
     0.436
AFN46496.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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