Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFN46373.1UbiC transcription regulator-associated domain protein. (245 aa)    
Predicted Functional Partners:
ptsP_2
Phosphoenolpyruvate-protein phosphotransferase.
  
  
 0.670
AFN46885.1
Transcriptional regulator, GntR family.
  
  
 0.596
AFN46728.1
FCD domain protein.
  
  
 0.591
AFN46207.1
PTS family porter, EIIC.
  
  
 0.581
AFN47705.1
Putative membrane protein.
       0.541
nagA
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.489
AFN47247.1
Transcriptional regulator, AraC family.
   
  
 0.487
AFN46271.1
Transcriptional regulator, TetR family.
   
    0.480
AFN46545.1
IclR helix-turn-helix domain protein.
   
  
 0.474
AFN45488.1
Cupin domain protein.
  
    0.472
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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