Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46764.1ABC transporter, ATP-binding protein. (256 aa)    
Predicted Functional Partners:
AFN47752.1
ABC transporter, permease protein.
 0.999
AFN46310.1
ABC transporter, substrate-binding protein, family 3.
 
 0.998
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.917
AFN44975.1
ABC transporter, ATP-binding protein.
 
   
0.909
AFN47413.1
ABC transporter, ATP-binding protein.
 
     
0.868
AFN47381.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.841
AFN45648.1
Putative D,D-dipeptide transport system permease protein DdpC.
 
    
 0.805
AFN45331.1
ABC transporter, ATP-binding protein.
 
    
0.781
AFN47545.1
ABC transporter, permease protein.
 
    
 0.770
AFN46098.1
ABC transporter transmembrane region.
 
     
0.759
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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