STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46332.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
AFN47484.1
Putative signal transduction histidine-protein kinase/phosphatase MprB.
   
 
 0.850
nifJ
Pyruvate synthase.
  
  
 0.846
AFN47425.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
  
 
 0.693
AFN46178.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
  
 
 0.693
AFN46007.1
Nonribosomal peptide synthase.
     
 0.668
AFN47463.1
KR domain protein.
  
  
 0.655
nadE
NAD(+) synthase (glutamine-hydrolyzing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.593
AFN45610.1
Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.552
AFN46258.1
Integrase core domain protein.
       0.512
polA
DNA polymerase I, thermostable; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.488
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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