STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47587.1ABC transporter, ATP-binding protein. (513 aa)    
Predicted Functional Partners:
AFN47106.1
ABC transporter, ATP-binding protein.
 
    0.689
AFN46939.1
Putative membrane protein.
       0.648
AFN45249.1
ABC transporter transmembrane region.
  
     0.630
AFN47463.1
KR domain protein.
  
 0.613
AFN46617.1
ABC transporter transmembrane region.
  
     0.607
AFN46827.1
ABC transporter, ATP-binding protein.
  
     0.588
AFN47597.1
ABC transporter, ATP-binding protein.
  
     0.566
AFN47413.1
ABC transporter, ATP-binding protein.
  
     0.560
AFN47001.1
ABC transporter, ATP-binding protein.
  
     0.532
AFN47246.1
ATPase, AAA family; Belongs to the AAA ATPase family.
 
 
  0.522
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.