Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45132.1Universal stress family protein. (166 aa)    
Predicted Functional Partners:
AFN47440.1
Transporter, major facilitator family protein.
 
    0.802
AFN45694.1
Hypothetical protein.
       0.714
AFN47120.1
6-O-methylguanine DNA methyltransferase, DNA binding domain protein.
  
  
 0.523
AFN47404.1
Arsenite-activated ATPase ArsA.
 
  
 0.486
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.475
AFN47463.1
KR domain protein.
  
  
 0.444
raiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.436
AFN47270.1
Transcriptional regulator, TetR family.
  
    0.434
pyn
Pyrimidine-nucleoside phosphorylase.
   
    0.426
AFN46193.1
Acetyltransferase, GNAT family.
  
  
 0.422
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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