STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45747.1Transcriptional regulator, TetR domain protein. (197 aa)    
Predicted Functional Partners:
AFN45087.1
Transporter, major facilitator family protein.
 
    0.766
AFN47032.1
Putative ATPase of the ABC class.
       0.721
AFN47442.1
Transcriptional regulator, TetR family.
  
     0.634
AFN45487.1
Transcriptional regulator, TetR family.
  
     0.609
AFN46751.1
Integrase core domain protein.
       0.520
AFN47728.1
Phosphate transporter family protein.
       0.504
AFN46462.1
Hypothetical protein.
       0.504
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.