STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45705.1CutC family protein; Belongs to the CutC family. (235 aa)    
Predicted Functional Partners:
AFN47267.1
Hydrolase, NUDIX family; Belongs to the Nudix hydrolase family.
 
     0.803
AFN46207.1
PTS family porter, EIIC.
  
  
 0.656
AFN47394.1
alpha-L-fucosidase.
 
   
 0.608
AFN46778.1
alpha-L-fucosidase.
 
   
 0.589
AFN45989.1
Hypothetical protein.
 
     0.587
AFN46864.1
Hypothetical protein.
  
     0.567
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.554
nagB
Glucosamine-6-phosphate deaminase.
 
   
 0.550
ptsP_2
Phosphoenolpyruvate-protein phosphotransferase.
  
  
 0.541
AFN46665.1
Hypothetical protein.
       0.518
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.