STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47254.1ABC transporter, permease protein. (230 aa)    
Predicted Functional Partners:
AFN45878.1
ABC transporter, ATP-binding protein.
 
 0.999
AFN46445.1
ABC transporter, quaternary amine uptake transporter family, substrate-binding protein.
 
 0.999
AFN45160.1
ABC transporter, permease protein.
 
 
0.996
AFN47177.1
Transcriptional regulator, MarR family.
  
    0.798
AFN45232.1
Alcohol dehydrogenase, zinc-dependent.
  
    0.783
AFN47753.1
ABC transporter, permease protein.
  
     0.755
AFN46546.1
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate.
  
    0.505
AFN46505.1
Pyridine nucleotide-disulfide oxidoreductase.
       0.495
nifJ
Pyruvate synthase.
       0.495
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.