STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45949.1Transcriptional regulator, MerR family. (203 aa)    
Predicted Functional Partners:
AFN45184.1
GroES-like domain protein.
       0.693
AFN47235.1
CRISPR-associated RAMP protein.
  
     0.684
AFN46496.1
Hypothetical protein.
  
     0.674
AFN45261.1
Efflux ABC transporter, permease protein.
  
     0.663
AFN46850.1
Putative CRISPR-associated protein.
  
     0.633
AFN46941.1
Hypothetical protein.
  
     0.603
AFN47002.1
Hypothetical protein.
  
     0.587
AFN46322.1
Aminoglycoside/hydroxyurea antibiotic resistance kinase.
  
     0.571
AFN45237.1
Hypothetical protein.
  
     0.539
AFN47207.1
Transcriptional regulator, TetR family.
  
     0.526
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.