Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45052.1 | AFN47102.1 | HMPREF9154_1277 | HMPREF9154_1759 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD linked oxidase, C-terminal domain protein. | 0.742 |
| AFN45052.1 | AFN47437.1 | HMPREF9154_1277 | HMPREF9154_1883 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD linked oxidase, C-terminal domain protein. | 0.707 |
| AFN45052.1 | fni | HMPREF9154_1277 | HMPREF9154_0773 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.760 |
| AFN45052.1 | nifJ | HMPREF9154_1277 | HMPREF9154_0751 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Pyruvate synthase. | 0.925 |
| AFN47093.1 | fni | HMPREF9154_0774 | HMPREF9154_0773 | Phosphomevalonate kinase. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.993 |
| AFN47093.1 | mvaD | HMPREF9154_0774 | HMPREF9154_0775 | Phosphomevalonate kinase. | Diphosphomevalonate decarboxylase. | 0.999 |
| AFN47093.1 | mvk | HMPREF9154_0774 | HMPREF9154_0776 | Phosphomevalonate kinase. | Mevalonate kinase. | 0.995 |
| AFN47102.1 | AFN45052.1 | HMPREF9154_1759 | HMPREF9154_1277 | FAD linked oxidase, C-terminal domain protein. | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.742 |
| AFN47102.1 | AFN47437.1 | HMPREF9154_1759 | HMPREF9154_1883 | FAD linked oxidase, C-terminal domain protein. | FAD linked oxidase, C-terminal domain protein. | 0.593 |
| AFN47102.1 | fni | HMPREF9154_1759 | HMPREF9154_0773 | FAD linked oxidase, C-terminal domain protein. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.704 |
| AFN47102.1 | nifJ | HMPREF9154_1759 | HMPREF9154_0751 | FAD linked oxidase, C-terminal domain protein. | Pyruvate synthase. | 0.937 |
| AFN47437.1 | AFN45052.1 | HMPREF9154_1883 | HMPREF9154_1277 | FAD linked oxidase, C-terminal domain protein. | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.707 |
| AFN47437.1 | AFN47102.1 | HMPREF9154_1883 | HMPREF9154_1759 | FAD linked oxidase, C-terminal domain protein. | FAD linked oxidase, C-terminal domain protein. | 0.593 |
| AFN47437.1 | fni | HMPREF9154_1883 | HMPREF9154_0773 | FAD linked oxidase, C-terminal domain protein. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.704 |
| AFN47437.1 | nifJ | HMPREF9154_1883 | HMPREF9154_0751 | FAD linked oxidase, C-terminal domain protein. | Pyruvate synthase. | 0.937 |
| AFN47543.1 | fni | HMPREF9154_2063 | HMPREF9154_0773 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.914 |
| AFN47543.1 | ispH | HMPREF9154_2063 | HMPREF9154_2680 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.956 |
| AFN47543.1 | mvaD | HMPREF9154_2063 | HMPREF9154_0775 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Diphosphomevalonate decarboxylase. | 0.937 |
| AFN47543.1 | uppS_2 | HMPREF9154_2063 | HMPREF9154_2688 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.976 |
| fni | AFN45052.1 | HMPREF9154_0773 | HMPREF9154_1277 | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.760 |
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