STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47660.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
AFN45006.1
Hypothetical protein.
       0.697
AFN45751.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
       0.674
AFN47094.1
Putative ribose transport, ATP-binding protein RbsA.
       0.606
AFN46446.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.606
AFN46715.1
Periplasmic binding protein and sugar binding domain of the LacI family protein.
       0.455
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.