STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46060.1Branched-chain amino acid ABC transporter. (251 aa)    
Predicted Functional Partners:
AFN47381.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AFN46288.1
Receptor family ligand-binding region.
 
 
 0.998
AFN46730.1
Branched-chain amino acid ABC transporter.
 
 
0.996
AFN45857.1
Hypothetical protein.
      0.888
AFN45415.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
       0.782
AFN46261.1
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE.
 
     
0.770
hutU
Urocanate hydratase.
       0.742
AFN45475.1
Phenylalanine and histidine ammonia-lyase.
       0.654
AFN46529.1
Putative lipoprotein.
       0.646
AFN45607.1
Hypothetical protein.
       0.561
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.