STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45763.1ABC-type cobalt transport system, permease protein. (211 aa)    
Predicted Functional Partners:
AFN45134.1
Cobalt transport protein.
 
  
 0.975
AFN46794.1
ABC transporter, ATP-binding protein.
 
  
 0.797
AFN47685.1
Cobalt transport protein.
 
  
 0.795
AFN45993.1
TENA/THI-4 family protein.
 
    0.549
AFN46687.1
ABC transporter, ATP-binding protein.
 
    0.498
AFN45895.1
Cobalt transport protein.
 
  
 0.481
AFN45859.1
Hydrolase, NUDIX family.
  
     0.461
AFN45273.1
ABC transporter, ATP-binding protein.
 
    0.461
thiD
Phosphomethylpyrimidine kinase.
  
    0.456
AFN46510.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.