STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45428.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
AFN47495.1
Hypothetical protein.
 
  
 0.986
AFN46859.1
Type II/IV secretion system protein.
 
  
 0.965
AFN47743.1
Type II secretion system F domain protein.
 
     0.964
AFN45503.1
SAF domain protein.
 
    0.963
AFN47105.1
LysM domain protein.
 
     0.914
AFN47797.1
Hypothetical protein.
 
  
 0.910
AFN45919.1
Hypothetical protein.
 
     0.772
AFN45425.1
Hypothetical protein.
 
     0.771
AFN47467.1
Hypothetical protein.
 
     0.771
AFN47783.1
Hypothetical protein.
 
     0.771
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.