STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47743.1Type II secretion system F domain protein. (283 aa)    
Predicted Functional Partners:
AFN46859.1
Type II/IV secretion system protein.
 
 
 0.997
AFN45428.1
Hypothetical protein.
 
  
  0.995
AFN47495.1
Hypothetical protein.
 
  
 0.987
AFN45503.1
SAF domain protein.
 
    0.967
AFN46449.1
Helicase/secretion neighborhood ATPase.
  
 
 0.955
AFN45459.1
Type II secretion system F domain protein.
  
  
  0.918
AFN47105.1
LysM domain protein.
 
     0.911
AFN47797.1
Hypothetical protein.
 
  
 0.906
AFN47783.1
Hypothetical protein.
 
     0.784
AFN45919.1
Hypothetical protein.
 
     0.784
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.