STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46577.1Periplasmic binding protein and sugar binding domain of the LacI family protein. (329 aa)    
Predicted Functional Partners:
AFN45394.1
Carbohydrate kinase, FGGY family protein.
   
 
 0.809
AFN45921.1
RbsD/FucU transport family protein; Belongs to the RbsD / FucU family.
       0.779
ptsP_2
Phosphoenolpyruvate-protein phosphotransferase.
  
 
 0.743
ptsP_1
Phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
   
 
 0.651
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
       0.500
ptsH
Phosphocarrier protein HPr.
   
 
 0.404
AFN46704.1
Periplasmic binding protein and sugar binding domain of the LacI family protein.
  
    0.403
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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