Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFN46123.1ABC transporter, ATP-binding protein. (307 aa)    
Predicted Functional Partners:
AFN47066.1
ABC transporter, ATP-binding protein.
 
    
0.913
AFN47468.1
ABC-2 type transporter.
 
    0.876
AFN47816.1
ABC transporter, ATP-binding domain protein.
 
    
0.668
AFN47795.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
 
    
0.514
AFN45438.1
ABC transporter, ATP-binding protein.
  
     0.490
AFN47587.1
ABC transporter, ATP-binding protein.
  
  0.484
AFN47575.1
ABC transporter, ATP-binding protein.
 
    
0.477
AFN47037.1
Glycosyltransferase, group 2 family protein.
  
    0.448
AFN44914.1
Hypothetical protein.
       0.446
AFN44970.1
ABC transporter, permease protein, DrrB family.
 
  
 0.436
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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