STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47468.1ABC-2 type transporter. (262 aa)    
Predicted Functional Partners:
AFN46123.1
ABC transporter, ATP-binding protein.
 
    0.876
AFN46346.1
Efflux ABC transporter, permease protein.
 
    0.639
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
  
  0.552
AFN46614.1
YcaO-like protein.
 
  
 0.522
AFN47386.1
ABC-2 type transporter.
  
  
  0.516
cbiQ
Cobalt ABC transporter, permease protein CbiQ.
  
  
  0.516
AFN47612.1
Methyltransferase domain protein.
  
     0.504
AFN45532.1
Nitroreductase family protein.
  
    0.447
bluB
cob(II)yrinic acid a,c-diamide reductase.
  
    0.447
AFN47037.1
Glycosyltransferase, group 2 family protein.
       0.446
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.