STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45542.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
AFN47119.1
WGR domain protein.
     0.957
AFN45899.1
Hypothetical protein.
 
  
 0.912
AFN46119.1
Hypothetical protein.
 
     0.907
AFN46839.1
Hypothetical protein.
 
  
 0.806
AFN46158.1
Hypothetical protein.
 
  
 0.791
AFN47364.1
Hypothetical protein.
 
    0.782
AFN45944.1
SWIM zinc finger domain protein.
 
     0.776
AFN46565.1
Hypothetical protein.
    0.767
AFN46934.1
Hypothetical protein.
 
    0.760
AFN46808.1
SWIM zinc finger domain protein.
       0.607
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.