STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47687.1Putative polyketide biosynthesis enoyl-CoA isomerase PksI; Belongs to the enoyl-CoA hydratase/isomerase family. (246 aa)    
Predicted Functional Partners:
AFN47463.1
KR domain protein.
 0.992
AFN47624.1
Beta-ketoacyl synthase, N-terminal domain protein.
 
 0.978
AFN45311.1
Putative hydroxymethylglutaryl-CoA synthase.
 
 
 0.918
fabD
[acyl-carrier-protein] S-malonyltransferase.
  
 0.893
fabG
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 0.823
AFN46765.1
Polyketide biosynthesis enoyl-CoA hydratase.
 
   
 0.818
AFN45651.1
enoyl-CoA hydratase/isomerase family protein.
 
   
 0.802
AFN47683.1
malonyl-CoA synthase family protein.
 
 
 0.756
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
  
     0.750
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.741
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.