STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46542.1SPFH/Band 7/PHB domain protein. (389 aa)    
Predicted Functional Partners:
AFN47432.1
Nodulation efficiency protein NfeD.
 
  
 0.965
hflB
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.853
AFN46654.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.705
AFN45880.1
FR47-like protein.
  
    0.598
AFN46200.1
Iron dependent repressor, metal binding/dimerization domain protein.
   
    0.579
AFN47331.1
Hypothetical protein.
  
  
 0.567
AFN46653.1
SPFH/Band 7/PHB domain protein.
     
 0.563
AFN47040.1
Peptidase, M16 family; Overlaps another CDS with the same product name.
  
 0.526
AFN45491.1
Peptidase, M16 family; Overlaps another CDS with the same product name.
  
 0.526
AFN45698.1
Acetyltransferase, GNAT family.
       0.506
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.