STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47533.1Transcriptional regulator, ArsR family. (222 aa)    
Predicted Functional Partners:
sufB
FeS assembly protein SufB.
  
    0.969
AFN46647.1
Putative FeS assembly protein SufD.
  
    0.875
sufC
FeS assembly ATPase SufC.
  
    0.866
ndoA
Naphthalene 1,2-dioxygenase system ferredoxin subunit.
       0.853
AFN47146.1
SUF system FeS assembly protein, NifU family.
  
  
 0.836
AFN47226.1
Hypothetical protein.
  
    0.774
AFN45550.1
Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.774
AFN46536.1
Hypothetical protein.
       0.774
AFN44913.1
Hypothetical protein.
  
     0.719
cobB-2
Transcriptional regulator, Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.604
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.