STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45550.1Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (411 aa)    
Predicted Functional Partners:
sufC
FeS assembly ATPase SufC.
  
 0.999
AFN47146.1
SUF system FeS assembly protein, NifU family.
 
 
 0.999
sufB
FeS assembly protein SufB.
 
 0.998
AFN46647.1
Putative FeS assembly protein SufD.
 
 
 0.991
AFN46536.1
Hypothetical protein.
 
  
 0.958
AFN47713.1
Putative cystathionine gamma-synthase.
    
 0.911
trxB
Thioredoxin-disulfide reductase.
  
 
 0.910
AFN47533.1
Transcriptional regulator, ArsR family.
       0.774
ndoA
Naphthalene 1,2-dioxygenase system ferredoxin subunit.
       0.774
nifJ
Pyruvate synthase.
  
  
 0.715
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.