STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47146.1SUF system FeS assembly protein, NifU family. (147 aa)    
Predicted Functional Partners:
AFN45550.1
Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.999
AFN46909.1
Aminotransferase, class V.
  
 0.998
AFN46536.1
Hypothetical protein.
 
    0.996
sufC
FeS assembly ATPase SufC.
 
  
 0.993
AFN46647.1
Putative FeS assembly protein SufD.
 
  
 0.985
sufB
FeS assembly protein SufB.
 
  
 0.982
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.941
AFN47175.1
ParA/MinD ATPase-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.856
nifJ
Pyruvate synthase.
     
 0.843
AFN47533.1
Transcriptional regulator, ArsR family.
  
  
 0.836
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.