Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFN45812.1Phosphotransferase enzyme family protein. (401 aa)    
Predicted Functional Partners:
AFN46891.1
Hypothetical protein.
 
     0.835
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.773
AFN47463.1
KR domain protein.
  
 
 0.699
AFN46864.1
Hypothetical protein.
  
     0.697
AFN44940.1
HAD hydrolase, family IB.
 
   
 0.648
AFN46718.1
Putative membrane protein.
  
     0.611
AFN47567.1
Methyltransferase domain protein.
  
 
 
 0.607
AFN46437.1
Basic membrane protein.
 
     0.600
AFN44922.1
Hypothetical protein.
  
     0.587
AFN46464.1
Acyltransferase.
  
 
   0.581
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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