STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46003.1Putative cytidine deaminase. (132 aa)    
Predicted Functional Partners:
pyn
Pyrimidine-nucleoside phosphorylase.
 
 0.998
AFN47052.1
Putative purine nucleotide phosphorylase.
 
 
 0.934
deoD
Purine nucleoside phosphorylase.
  
 
 0.924
tdk
Thymidine kinase.
    
 0.919
AFN45375.1
5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family.
    
 0.907
AFN44917.1
5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family.
    
 0.906
AFN45147.1
5'-nucleotidase.
     
  0.900
add
Adenosine deaminase.
 
   
 0.888
AFN47547.1
ABC transporter, ATP-binding protein.
  
  
 0.877
AFN45211.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.874
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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