STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45823.1Putative 3-dehydro-L-gulonate-6-phosphate decarboxylase. (216 aa)    
Predicted Functional Partners:
AFN46471.1
L-ribulose-5-phosphate 3-epimerase.
 
 0.998
AFN45990.1
Putative L-ribulose-5-phosphate 4-epimerase.
  
 0.979
AFN46519.1
Phosphotriesterase family protein.
 
     0.956
AFN45535.1
Carbohydrate kinase, PfkB family.
 
    0.892
AFN47283.1
Transporter, major facilitator family protein.
 
    0.863
AFN46780.1
Sugar-binding domain protein.
 
     0.657
AFN46239.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
 
  
 0.624
AFN45316.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
  
  
 0.564
AFN47450.1
PTS system sugar-specific permease protein.
 
   
 0.547
AFN46207.1
PTS family porter, EIIC.
  
  
 0.467
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.