STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47387.1O-methyltransferase. (218 aa)    
Predicted Functional Partners:
AFN47463.1
KR domain protein.
 
 
 0.862
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.616
AFN45925.1
Hypothetical protein.
       0.556
AFN46007.1
Nonribosomal peptide synthase.
 
 
 
 0.547
AFN46534.1
Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
       0.542
AFN45585.1
Putative twin arginine-targeting protein translocase TatB.
       0.522
aroK_2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
     
 0.520
AFN47624.1
Beta-ketoacyl synthase, N-terminal domain protein.
 
  
 0.501
AFN46867.1
Transcriptional regulator, TetR family.
     
 0.477
AFN45851.1
Hypothetical protein.
       0.436
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.