Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45441.1 | AFN46724.1 | HMPREF9154_2700 | HMPREF9154_1194 | Hypothetical protein. | RNB-like protein. | 0.683 |
| AFN45441.1 | rph | HMPREF9154_2700 | HMPREF9154_0974 | Hypothetical protein. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.521 |
| AFN45792.1 | AFN46724.1 | HMPREF9154_2081 | HMPREF9154_1194 | Hypothetical protein. | RNB-like protein. | 0.605 |
| AFN45792.1 | AFN47657.1 | HMPREF9154_2081 | HMPREF9154_1549 | Hypothetical protein. | Putative ribonuclease D. | 0.585 |
| AFN45792.1 | pheT | HMPREF9154_2081 | HMPREF9154_2036 | Hypothetical protein. | phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.785 |
| AFN45792.1 | rplX | HMPREF9154_2081 | HMPREF9154_2246 | Hypothetical protein. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.979 |
| AFN45792.1 | rpsA | HMPREF9154_2081 | HMPREF9154_1904 | Hypothetical protein. | 30S ribosomal protein S1. | 0.975 |
| AFN45978.1 | AFN46724.1 | HMPREF9154_0353 | HMPREF9154_1194 | Hydrolase, NUDIX family. | RNB-like protein. | 0.683 |
| AFN45978.1 | rph | HMPREF9154_0353 | HMPREF9154_0974 | Hydrolase, NUDIX family. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.521 |
| AFN46002.1 | AFN46724.1 | HMPREF9154_1192 | HMPREF9154_1194 | Metallopeptidase family M24; Belongs to the peptidase M24B family. | RNB-like protein. | 0.564 |
| AFN46002.1 | AFN47346.1 | HMPREF9154_1192 | HMPREF9154_1193 | Metallopeptidase family M24; Belongs to the peptidase M24B family. | Zinc ribbon domain protein. | 0.573 |
| AFN46002.1 | pheT | HMPREF9154_1192 | HMPREF9154_2036 | Metallopeptidase family M24; Belongs to the peptidase M24B family. | phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.507 |
| AFN46724.1 | AFN45441.1 | HMPREF9154_1194 | HMPREF9154_2700 | RNB-like protein. | Hypothetical protein. | 0.683 |
| AFN46724.1 | AFN45792.1 | HMPREF9154_1194 | HMPREF9154_2081 | RNB-like protein. | Hypothetical protein. | 0.605 |
| AFN46724.1 | AFN45978.1 | HMPREF9154_1194 | HMPREF9154_0353 | RNB-like protein. | Hydrolase, NUDIX family. | 0.683 |
| AFN46724.1 | AFN46002.1 | HMPREF9154_1194 | HMPREF9154_1192 | RNB-like protein. | Metallopeptidase family M24; Belongs to the peptidase M24B family. | 0.564 |
| AFN46724.1 | AFN47346.1 | HMPREF9154_1194 | HMPREF9154_1193 | RNB-like protein. | Zinc ribbon domain protein. | 0.805 |
| AFN46724.1 | AFN47657.1 | HMPREF9154_1194 | HMPREF9154_1549 | RNB-like protein. | Putative ribonuclease D. | 0.952 |
| AFN46724.1 | pheT | HMPREF9154_1194 | HMPREF9154_2036 | RNB-like protein. | phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.645 |
| AFN46724.1 | rph | HMPREF9154_1194 | HMPREF9154_0974 | RNB-like protein. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.990 |
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