STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46047.1ABC transporter, ATP-binding protein. (289 aa)    
Predicted Functional Partners:
AFN47111.1
ABC-2 type transporter.
 
    0.942
AFN46762.1
ABC transporter, ATP-binding protein.
 
    
0.925
AFN45703.1
DNA-binding helix-turn-helix protein.
 
     0.827
AFN47386.1
ABC-2 type transporter.
    0.550
AFN47592.1
Hypothetical protein.
  
   0.487
glnA
Glutamine synthetase, type I.
       0.482
AFN47702.1
Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
   
0.448
AFN45739.1
MMPL family protein.
       0.434
AFN44970.1
ABC transporter, permease protein, DrrB family.
  
 0.416
AFN46252.1
Hypothetical protein.
  
   0.413
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.