STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46451.1UbiC transcription regulator-associated domain protein. (232 aa)    
Predicted Functional Partners:
ptsP_2
Phosphoenolpyruvate-protein phosphotransferase.
     
 0.655
AFN45369.1
ABC transporter, ATP-binding protein.
     
 0.650
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.560
AFN46545.1
IclR helix-turn-helix domain protein.
  
  
 0.533
AFN46885.1
Transcriptional regulator, GntR family.
  
    0.502
AFN47247.1
Transcriptional regulator, AraC family.
   
    0.502
AFN46728.1
FCD domain protein.
  
    0.485
AFN46271.1
Transcriptional regulator, TetR family.
   
    0.483
AFN46207.1
PTS family porter, EIIC.
  
  
 0.466
AFN47226.1
Hypothetical protein.
   
    0.450
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.