Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45135.1 | AFN45369.1 | HMPREF9154_1238 | HMPREF9154_1237 | Hypothetical protein. | ABC transporter, ATP-binding protein. | 0.698 |
| AFN45135.1 | gcvP | HMPREF9154_1238 | HMPREF9154_1903 | Hypothetical protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.519 |
| AFN45135.1 | lipA | HMPREF9154_1238 | HMPREF9154_1239 | Hypothetical protein. | Putative lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.861 |
| AFN45135.1 | lipB | HMPREF9154_1238 | HMPREF9154_1240 | Hypothetical protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.687 |
| AFN45369.1 | AFN45135.1 | HMPREF9154_1237 | HMPREF9154_1238 | ABC transporter, ATP-binding protein. | Hypothetical protein. | 0.698 |
| AFN45369.1 | lipA | HMPREF9154_1237 | HMPREF9154_1239 | ABC transporter, ATP-binding protein. | Putative lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.548 |
| AFN45369.1 | lipB | HMPREF9154_1237 | HMPREF9154_1240 | ABC transporter, ATP-binding protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.440 |
| AFN45387.1 | AFN46853.1 | HMPREF9154_0611 | HMPREF9154_0646 | Biotin/lipoate A/B protein ligase family protein. | Dehydrogenase E1 component. | 0.968 |
| AFN45387.1 | gcvH | HMPREF9154_0611 | HMPREF9154_1902 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.967 |
| AFN45387.1 | gcvP | HMPREF9154_0611 | HMPREF9154_1903 | Biotin/lipoate A/B protein ligase family protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.531 |
| AFN45387.1 | lipA | HMPREF9154_0611 | HMPREF9154_1239 | Biotin/lipoate A/B protein ligase family protein. | Putative lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.944 |
| AFN45387.1 | lipB | HMPREF9154_0611 | HMPREF9154_1240 | Biotin/lipoate A/B protein ligase family protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.927 |
| AFN45387.1 | sucA | HMPREF9154_0611 | HMPREF9154_1400 | Biotin/lipoate A/B protein ligase family protein. | Oxoglutarate dehydrogenase (succinyl-transferring), E1 component. | 0.933 |
| AFN45387.1 | sucB | HMPREF9154_0611 | HMPREF9154_2104 | Biotin/lipoate A/B protein ligase family protein. | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. | 0.723 |
| AFN46853.1 | AFN45387.1 | HMPREF9154_0646 | HMPREF9154_0611 | Dehydrogenase E1 component. | Biotin/lipoate A/B protein ligase family protein. | 0.968 |
| AFN46853.1 | gcvH | HMPREF9154_0646 | HMPREF9154_1902 | Dehydrogenase E1 component. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.879 |
| AFN46853.1 | gcvP | HMPREF9154_0646 | HMPREF9154_1903 | Dehydrogenase E1 component. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.515 |
| AFN46853.1 | lipA | HMPREF9154_0646 | HMPREF9154_1239 | Dehydrogenase E1 component. | Putative lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.590 |
| AFN46853.1 | lipB | HMPREF9154_0646 | HMPREF9154_1240 | Dehydrogenase E1 component. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.580 |
| AFN46853.1 | sucA | HMPREF9154_0646 | HMPREF9154_1400 | Dehydrogenase E1 component. | Oxoglutarate dehydrogenase (succinyl-transferring), E1 component. | 0.999 |
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