STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46169.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
AFN45307.1
CobN/magnesium chelatase domain protein.
 
  
 0.868
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.843
cobO
cob(I)yrinic acid a,c-diamide adenosyltransferase.
 
   
 0.828
cobA
uroporphyrinogen-III C-methyltransferase.
       0.781
bchI_1
Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name.
  
     0.773
cobJ
precorrin-3B C(17)-methyltransferase.
     
 0.660
cbiE
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
     
 0.612
AFN45313.1
Hypothetical protein.
       0.515
bchI_2
Magnesium-chelatase 38 kDa subunit; Overlaps another CDS with the same product name.
 
 
0.505
AFN47182.1
Von Willebrand factor type A domain protein; Overlaps another CDS with the same product name.
  
 
 0.442
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.