STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
cobBCobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (802 aa)    
Predicted Functional Partners:
cobJ
precorrin-3B C(17)-methyltransferase.
 
  
 0.998
cobO
cob(I)yrinic acid a,c-diamide adenosyltransferase.
 
 
 0.997
cbiE
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
 
  
 0.996
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 0.995
cobH_2
precorrin-8X methylmutase.
 
 0.993
cobH_1
precorrin-8X methylmutase.
 
 0.991
cbiX_1
Sirohydrochlorin cobaltochelatase.
 
   
 0.981
AFN45307.1
CobN/magnesium chelatase domain protein.
 
 
 0.978
cobU
Bifunctional adenosylcobalamin biosynthesis protein CobU.
 
  
 0.974
cobA
uroporphyrinogen-III C-methyltransferase.
   
 0.972
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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