Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45052.1 | AFN46042.1 | HMPREF9154_1277 | HMPREF9154_1279 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Iron-sulfur cluster-binding protein. | 0.929 |
| AFN45052.1 | AFN46166.1 | HMPREF9154_1277 | HMPREF9154_1598 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Putative (S)-mandelate dehydrogenase. | 0.868 |
| AFN45052.1 | AFN46728.1 | HMPREF9154_1277 | HMPREF9154_1271 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FCD domain protein. | 0.660 |
| AFN45052.1 | AFN46996.1 | HMPREF9154_1277 | HMPREF9154_1278 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Cysteine-rich domain protein. | 0.835 |
| AFN45052.1 | AFN47102.1 | HMPREF9154_1277 | HMPREF9154_1759 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD linked oxidase, C-terminal domain protein. | 0.742 |
| AFN45052.1 | AFN47437.1 | HMPREF9154_1277 | HMPREF9154_1883 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD linked oxidase, C-terminal domain protein. | 0.707 |
| AFN45052.1 | AFN47617.1 | HMPREF9154_1277 | HMPREF9154_1280 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Hypothetical protein. | 0.855 |
| AFN45052.1 | fni | HMPREF9154_1277 | HMPREF9154_0773 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.760 |
| AFN45052.1 | nifJ | HMPREF9154_1277 | HMPREF9154_0751 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Pyruvate synthase. | 0.925 |
| AFN45052.1 | pta | HMPREF9154_1277 | HMPREF9154_0302 | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.553 |
| AFN46042.1 | AFN45052.1 | HMPREF9154_1279 | HMPREF9154_1277 | Iron-sulfur cluster-binding protein. | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.929 |
| AFN46042.1 | AFN46728.1 | HMPREF9154_1279 | HMPREF9154_1271 | Iron-sulfur cluster-binding protein. | FCD domain protein. | 0.437 |
| AFN46042.1 | AFN46996.1 | HMPREF9154_1279 | HMPREF9154_1278 | Iron-sulfur cluster-binding protein. | Cysteine-rich domain protein. | 0.999 |
| AFN46042.1 | AFN47102.1 | HMPREF9154_1279 | HMPREF9154_1759 | Iron-sulfur cluster-binding protein. | FAD linked oxidase, C-terminal domain protein. | 0.868 |
| AFN46042.1 | AFN47437.1 | HMPREF9154_1279 | HMPREF9154_1883 | Iron-sulfur cluster-binding protein. | FAD linked oxidase, C-terminal domain protein. | 0.850 |
| AFN46042.1 | AFN47617.1 | HMPREF9154_1279 | HMPREF9154_1280 | Iron-sulfur cluster-binding protein. | Hypothetical protein. | 0.999 |
| AFN46042.1 | nifJ | HMPREF9154_1279 | HMPREF9154_0751 | Iron-sulfur cluster-binding protein. | Pyruvate synthase. | 0.994 |
| AFN46042.1 | pta | HMPREF9154_1279 | HMPREF9154_0302 | Iron-sulfur cluster-binding protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.539 |
| AFN46166.1 | AFN45052.1 | HMPREF9154_1598 | HMPREF9154_1277 | Putative (S)-mandelate dehydrogenase. | Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.868 |
| AFN46166.1 | AFN47102.1 | HMPREF9154_1598 | HMPREF9154_1759 | Putative (S)-mandelate dehydrogenase. | FAD linked oxidase, C-terminal domain protein. | 0.704 |
page 1 of 4