Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47428.1ABC transporter, ATP-binding protein. (201 aa)    
Predicted Functional Partners:
AFN44975.1
ABC transporter, ATP-binding protein.
  
0.991
AFN45733.1
ABC transporter, permease protein.
  
 0.981
AFN46999.1
ABC transporter, permease protein.
 
  
 0.957
AFN47771.1
ABC transporter, substrate-binding protein, family 5.
 
  
 0.956
AFN47545.1
ABC transporter, permease protein.
  
 0.716
AFN45713.1
ABC transporter, ATP-binding protein.
 
    
0.686
AFN45648.1
Putative D,D-dipeptide transport system permease protein DdpC.
  
 0.685
AFN45389.1
Putative nickel transport system permease protein NikC.
  
 0.683
AFN46764.1
ABC transporter, ATP-binding protein.
 
     0.649
AFN47812.1
ABC transporter, ATP-binding protein.
 
    
0.646
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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