AFN45661.1 protein (Pseudopropionibacterium propionicum)

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Score

AFN45661.1

GtrA-like protein. (197 aa)

Predicted Functional Partners:

mutM

0.819

smc

0.816

rnc

0.794

rpmF

0.684

AFN45412.1

0.478

Your Current Organism:

Pseudopropionibacterium propionicum

NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFN45412.1	AFN45661.1	HMPREF9154_1300	HMPREF9154_1304	Hypothetical protein.	GtrA-like protein.	0.478
AFN45412.1	mutM	HMPREF9154_1300	HMPREF9154_1303	Hypothetical protein.	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	0.713
AFN45412.1	rnc	HMPREF9154_1300	HMPREF9154_1302	Hypothetical protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.875
AFN45412.1	rpmF	HMPREF9154_1300	HMPREF9154_1301	Hypothetical protein.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.971
AFN45412.1	smc	HMPREF9154_1300	HMPREF9154_1305	Hypothetical protein.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.631
AFN45661.1	AFN45412.1	HMPREF9154_1304	HMPREF9154_1300	GtrA-like protein.	Hypothetical protein.	0.478
AFN45661.1	mutM	HMPREF9154_1304	HMPREF9154_1303	GtrA-like protein.	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	0.819
AFN45661.1	rnc	HMPREF9154_1304	HMPREF9154_1302	GtrA-like protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.794
AFN45661.1	rpmF	HMPREF9154_1304	HMPREF9154_1301	GtrA-like protein.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.684
AFN45661.1	smc	HMPREF9154_1304	HMPREF9154_1305	GtrA-like protein.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.816
mutM	AFN45412.1	HMPREF9154_1303	HMPREF9154_1300	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	Hypothetical protein.	0.713
mutM	AFN45661.1	HMPREF9154_1303	HMPREF9154_1304	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	GtrA-like protein.	0.819
mutM	rnc	HMPREF9154_1303	HMPREF9154_1302	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.888
mutM	rpmF	HMPREF9154_1303	HMPREF9154_1301	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.805
mutM	smc	HMPREF9154_1303	HMPREF9154_1305	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.819
rnc	AFN45412.1	HMPREF9154_1302	HMPREF9154_1300	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Hypothetical protein.	0.875
rnc	AFN45661.1	HMPREF9154_1302	HMPREF9154_1304	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	GtrA-like protein.	0.794
rnc	mutM	HMPREF9154_1302	HMPREF9154_1303	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.	0.888
rnc	rpmF	HMPREF9154_1302	HMPREF9154_1301	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.989
rnc	smc	HMPREF9154_1302	HMPREF9154_1305	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.831