Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45128.1 | AFN46018.1 | HMPREF9154_1315 | HMPREF9154_1312 | Putative signal peptide peptidase SppA, 36K type. | Histidine kinase. | 0.443 |
| AFN45128.1 | AFN47742.1 | HMPREF9154_1315 | HMPREF9154_1314 | Putative signal peptide peptidase SppA, 36K type. | Amidohydrolase family protein. | 0.697 |
| AFN45128.1 | ffh | HMPREF9154_1315 | HMPREF9154_1313 | Putative signal peptide peptidase SppA, 36K type. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.587 |
| AFN45475.1 | AFN47381.1 | HMPREF9154_0840 | HMPREF9154_0834 | Phenylalanine and histidine ammonia-lyase. | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.677 |
| AFN45475.1 | AFN47742.1 | HMPREF9154_0840 | HMPREF9154_1314 | Phenylalanine and histidine ammonia-lyase. | Amidohydrolase family protein. | 0.873 |
| AFN45475.1 | hutU | HMPREF9154_0840 | HMPREF9154_0838 | Phenylalanine and histidine ammonia-lyase. | Urocanate hydratase. | 0.999 |
| AFN45475.1 | rocF | HMPREF9154_0840 | HMPREF9154_2092 | Phenylalanine and histidine ammonia-lyase. | Arginase; Belongs to the arginase family. | 0.733 |
| AFN46018.1 | AFN45128.1 | HMPREF9154_1312 | HMPREF9154_1315 | Histidine kinase. | Putative signal peptide peptidase SppA, 36K type. | 0.443 |
| AFN46018.1 | AFN47742.1 | HMPREF9154_1312 | HMPREF9154_1314 | Histidine kinase. | Amidohydrolase family protein. | 0.485 |
| AFN46018.1 | ffh | HMPREF9154_1312 | HMPREF9154_1313 | Histidine kinase. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.603 |
| AFN46708.1 | AFN47742.1 | HMPREF9154_0005 | HMPREF9154_1314 | Hypothetical protein. | Amidohydrolase family protein. | 0.423 |
| AFN47381.1 | AFN45475.1 | HMPREF9154_0834 | HMPREF9154_0840 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Phenylalanine and histidine ammonia-lyase. | 0.677 |
| AFN47381.1 | AFN47742.1 | HMPREF9154_0834 | HMPREF9154_1314 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Amidohydrolase family protein. | 0.430 |
| AFN47381.1 | hutU | HMPREF9154_0834 | HMPREF9154_0838 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Urocanate hydratase. | 0.771 |
| AFN47742.1 | AFN45128.1 | HMPREF9154_1314 | HMPREF9154_1315 | Amidohydrolase family protein. | Putative signal peptide peptidase SppA, 36K type. | 0.697 |
| AFN47742.1 | AFN45475.1 | HMPREF9154_1314 | HMPREF9154_0840 | Amidohydrolase family protein. | Phenylalanine and histidine ammonia-lyase. | 0.873 |
| AFN47742.1 | AFN46018.1 | HMPREF9154_1314 | HMPREF9154_1312 | Amidohydrolase family protein. | Histidine kinase. | 0.485 |
| AFN47742.1 | AFN46708.1 | HMPREF9154_1314 | HMPREF9154_0005 | Amidohydrolase family protein. | Hypothetical protein. | 0.423 |
| AFN47742.1 | AFN47381.1 | HMPREF9154_1314 | HMPREF9154_0834 | Amidohydrolase family protein. | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.430 |
| AFN47742.1 | ffh | HMPREF9154_1314 | HMPREF9154_1313 | Amidohydrolase family protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.909 |
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