STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46653.1SPFH/Band 7/PHB domain protein. (500 aa)    
Predicted Functional Partners:
AFN45801.1
Nodulation efficiency protein NfeD.
       0.769
AFN47432.1
Nodulation efficiency protein NfeD.
  
  
 0.659
AFN47765.1
PspA/IM30 family protein.
  
  
 0.609
AFN45304.1
TrkA N-terminal domain protein.
 
     0.556
AFN46100.1
Type III restriction enzyme, res subunit.
 
     0.521
AFN46542.1
SPFH/Band 7/PHB domain protein.
   
 0.481
AFN45007.1
SPFH/Band 7/PHB domain protein.
   
 0.438
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.