STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45365.1Putative bacitracin ABC transporter, ATP-binding protein BcrA. (304 aa)    
Predicted Functional Partners:
AFN47287.1
Putative membrane protein.
 
    0.943
AFN47816.1
ABC transporter, ATP-binding domain protein.
 
    
0.834
AFN46456.1
Putative membrane protein.
 
    0.778
AFN47550.1
Putative membrane protein.
 
    0.754
AFN46908.1
Putative membrane protein.
    0.706
AFN46265.1
Histidine kinase.
  
    0.547
AFN47589.1
Response regulator receiver domain protein.
  
    0.538
AFN47592.1
Hypothetical protein.
  
   0.487
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.428
AFN46252.1
Hypothetical protein.
  
   0.413
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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