Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFN47287.1Putative membrane protein. (252 aa)    
Predicted Functional Partners:
AFN45365.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
 
    0.943
AFN47550.1
Putative membrane protein.
  
  
 
0.924
AFN45756.1
Hypothetical protein.
     
  0.900
AFN46120.1
Putative membrane protein.
     
  0.900
AFN46908.1
Putative membrane protein.
 
     0.785
AFN46456.1
Putative membrane protein.
       0.783
AFN45161.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
  
    0.767
AFN46024.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
  
    0.734
bcrA
Bacitracin ABC transporter, ATP-binding protein BcrA.
  
    0.689
AFN46550.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
  
     0.616
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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