STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46191.1ABC transporter, substrate-binding protein, family 5. (506 aa)    
Predicted Functional Partners:
AFN45144.1
ABC transporter, permease protein.
   0.980
AFN47545.1
ABC transporter, permease protein.
 
 0.970
AFN46652.1
Putative glutathione ABC transporter, permease protein GsiC.
   0.966
AFN46033.1
Putative glutathione ABC transporter, permease protein GsiC.
   0.915
AFN45221.1
ABC transporter, permease protein.
   0.907
AFN46999.1
ABC transporter, permease protein.
   0.825
AFN45389.1
Putative nickel transport system permease protein NikC.
 
 0.799
AFN45648.1
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.788
nifJ
Pyruvate synthase.
  
    0.731
AFN45733.1
ABC transporter, permease protein.
 
 0.696
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.